Contents
*.out.nc
*.big.nc
*.restart.nc
hermite_ladder_coeffs()
hermite_normed()
hermite_physicists()
laguerre()
J_l_all()
bessel_j0()
bessel_j1()
gamma0()
gx_factorial()
gx_laguerre_nj()
gx_laguerre_transform()
sum_Jl2()
FluxTubeGeometryData
SAlphaGeometry
SlabGeometry
apply_geometry_grid_defaults()
apply_gx_geometry_grid_defaults()
build_flux_tube_geometry()
effective_boundary()
ensure_flux_tube_geometry_data()
gx_effective_boundary()
gx_twist_shift_params()
gx_zero_shat_enabled()
load_gx_geometry_netcdf()
sample_flux_tube_geometry()
twist_shift_params()
zero_shear_enabled()
booz_xform_flux_tube_mapping_from_inputs()
booz_xform_flux_tube_sensitivity_report()
booz_xform_spectral_sensitivity_report()
discover_differentiable_geometry_backends()
evaluate_boozer_bmag_on_field_line()
finite_difference_jacobian()
flux_tube_geometry_from_mapping()
flux_tube_geometry_from_vmec_boozer_state()
flux_tube_geometry_observables()
geometry_inverse_design_report()
geometry_observable_names()
geometry_sensitivity_report()
observable_gradient_validation_report()
vmec_boundary_aspect_sensitivity_report()
vmec_field_line_tensor_observable_names()
vmec_jax_boozer_equal_arc_core_profiles_from_state()
vmec_jax_boozer_flux_tube_sensitivity_report()
vmec_jax_field_line_tensor_sensitivity_report()
vmec_jax_flux_tube_array_parity_report()
vmec_jax_flux_tube_mapping_from_state()
vmec_jax_flux_tube_sensitivity_report()
vmec_jax_metric_tensor_sensitivity_report()
vmec_metric_tensor_observable_names()
SpectralGrid
gx_real_fft_kx()
gx_real_fft_ky()
gx_real_fft_mesh()
real_fft_mesh()
real_fft_ordered_kx()
real_fft_unique_ky()
select_gx_real_fft_ky_grid()
select_ky_grid()
select_real_fft_ky_grid()
twothirds_mask()
hermite_streaming()
integrate_linear()
integrate_linear_diagnostics()
linear_rhs()
linear_rhs_cached()
_build_linked_end_damping_profile()
_build_linked_fft_maps()
LinearCache
_build_end_damping_profile_array()
_build_gyroaverage_cache_arrays()
_build_low_rank_moment_cache_arrays()
build_linear_cache()
collision_damping()
hypercollision_damping()
apply_hermite_v()
apply_hermite_v2()
apply_laguerre_x()
build_H()
compute_b()
diamagnetic_drive_coeffs()
energy_operator()
grad_z_periodic()
lenard_bernstein_eigenvalues()
quasineutrality_phi()
shift_axis()
streaming_term()
LinearParams
LinearTerms
_as_species_array()
linear_terms_to_term_config()
term_config_to_linear_terms()
_electrostatic_streaming_field_rhs()
_linear_rhs_electrostatic_slices_velocity_sharded_fused()
_resolve_parallel_devices()
_streaming_electrostatic_from_phi_velocity_sharded()
linear_rhs_electrostatic_slices_velocity_sharded()
linear_rhs_parallel_cached()
linear_rhs_streaming_electrostatic_velocity_sharded()
linear_rhs_streaming_velocity_sharded()
_sample_indices_with_final()
IMEXLinearOperator
_apply_collision_split()
_collision_damping()
_gx_nonlinear_omega_components()
_gx_omega_mode_mask()
_make_fixed_mode_projector()
_make_hermitian_projector()
build_nonlinear_imex_operator()
NonlinearReplicateSpreadConfig
nonlinear_replicate_spread_report()
NonlinearReplicateFollowupConfig
nonlinear_replicate_followup_plan()
CycloneComparison
CycloneReference
CycloneRunResult
CycloneScanResult
LinearRunResult
LinearScanResult
compare_cyclone_to_reference()
load_cyclone_reference()
load_cyclone_reference_kinetic()
load_etg_reference()
load_kbm_reference()
load_tem_reference()
run_cyclone_linear()
run_cyclone_scan()
run_etg_linear()
run_etg_scan()
run_kbm_beta_scan()
run_kbm_linear()
run_kbm_scan()
run_kinetic_linear()
run_kinetic_scan()
run_tem_linear()
run_tem_scan()
select_kbm_solver_auto()
ScanFitWindowPolicy
apply_auto_fit_scan_policy()
indexed_float_value()
indexed_scan_value()
normalize_fit_signal()
normalize_solver_key()
resolve_scan_mode_method()
scan_window_valid()
should_use_ky_batch()
ScanAndModeResult
branch_continuity_metrics()
compare_eigenfunctions()
estimate_observed_order()
infer_triple_dealiased_ny()
late_time_linear_metrics()
late_time_window()
load_diagnostic_time_series()
load_eigenfunction_reference_bundle()
nonlinear_heat_flux_convergence_metrics()
normalize_eigenfunction()
phase_align_eigenfunction()
run_linear_scan()
run_scan_and_mode()
save_eigenfunction_reference_bundle()
windowed_nonlinear_metrics()
zonal_flow_response_metrics()
BranchContinuationMetrics
DiagnosticTimeSeries
EigenfunctionComparisonMetrics
EigenfunctionReferenceBundle
GateReport
LateTimeLinearMetrics
NonlinearHeatFluxConvergenceMetrics
NonlinearWindowMetrics
ObservedOrderMetrics
ScalarGateResult
ZonalFlowResponseMetrics
branch_continuity_gate_report()
eigenfunction_gate_report()
evaluate_scalar_gate()
gate_report()
gate_report_to_dict()
linear_metrics_gate_report()
nonlinear_heat_flux_convergence_gate_report()
nonlinear_window_gate_report()
observed_order_gate_report()
zonal_response_gate_report()
autodiff_finite_difference_report()
central_finite_difference_jacobian()
covariance_diagnostics()
explicit_complex_operator_matrix()
implicit_eigenpair_observable_sensitivity_report()
isolated_eigenpair_observable_sensitivity_report()
isolated_eigenvalue_sensitivity_report()
IndependentEnsembleProvenanceReport
IndependentMapExecutionError
IndependentWorkerMetadata
ParallelIdentityReport
batch_map()
batch_map_identity_report()
independent_ensemble_provenance_gate()
independent_map()
independent_map_identity_report()
independent_worker_metadata()
ky_scan_batches()
pad_to_multiple()
parallel_identity_report()
split_evenly()
VelocityShardingPlan
build_velocity_sharding_plan()
curvature_gradb_drift_reference()
curvature_gradb_drift_shard_map()
diamagnetic_drive_reference()
diamagnetic_drive_shard_map()
electrostatic_phi_reference()
electrostatic_phi_shard_map()
hermite_neighbor_reference()
hermite_neighbor_shard_map()
hermite_shift_reference()
hermite_shift_shard_map()
hermite_streaming_ladder_reference()
hermite_streaming_ladder_shard_map()
mirror_drift_reference()
mirror_drift_shard_map()
periodic_streaming_reference()
periodic_streaming_shard_map()
velocity_field_reduce_reference()
velocity_field_reduce_shard_map()
integrate_linear_sharded()
integrate_nonlinear_sharded()
ModeSelection
ModeSelectionBatch
density_moment()
extract_eigenfunction()
extract_mode()
extract_mode_time_series()
fit_growth_rate()
fit_growth_rate_auto()
fit_growth_rate_auto_with_stats()
fit_growth_rate_with_stats()
gx_growth_rate_from_omega_series()
gx_growth_rate_from_phi()
select_fit_window()
select_fit_window_loglinear()
select_ky_index()
LinearValidationPanel
MultiReferenceValidationPanel
ReferenceSeries
cyclone_comparison_figure()
cyclone_reference_figure()
eigenfunction_overlap_summary_figure()
eigenfunction_reference_overlay_figure()
etg_trend_figure()
growth_fit_figure()
growth_rate_heatmap()
linear_runtime_panel_figure()
linear_validation_figure()
linear_validation_multi_reference_figure()
nonlinear_runtime_panel_figure()
plot_saved_output()
scan_comparison_figure()
scan_multi_reference_figure()
set_plot_style()
zonal_flow_response_figure()
CycloneBaseCase
ETGBaseCase
ETGModelConfig
GeometryConfig
GridConfig
InitializationConfig
KBMBaseCase
KineticElectronBaseCase
KineticElectronModelConfig
ModelConfig
TEMBaseCase
TEMModelConfig
TimeConfig
explicit_method_default_cfl_fac()
gx_default_cfl_fac()
resolve_cfl_fac()
NormalizationContract
apply_diagnostic_normalization()
get_normalization_contract()
RuntimeCollisionConfig
RuntimeConfig
RuntimeExpertConfig
RuntimeNormalizationConfig
RuntimeOutputConfig
RuntimeParallelConfig
RuntimePhysicsConfig
RuntimeQuasilinearConfig
RuntimeSpeciesConfig
RuntimeTermsConfig
RuntimeIndependentParallelPlan
_infer_runtime_nonlinear_steps()
_parallel_requests_combined_ky_scan()
_runtime_external_phi()
_runtime_independent_parallel_plan()
NonlinearArtifactPolicy
RuntimeArtifactHandoffDeps
RuntimeProgressSnapshot
RuntimeScanBatchDeps
build_runtime_progress_message()
format_duration()
resolve_nonlinear_artifact_policy()
run_runtime_nonlinear_artifact_handoff()
run_runtime_scan_batch()
QuasilinearTransportResult
compute_quasilinear_from_linear_state()
effective_kperp2()
mixing_length_amplitude2_jax()
normalize_quasilinear_channels()
phi_norm2()
quasilinear_feature_objective()
saturated_flux_from_linear_weight()
saturation_amplitude2()
shape_aware_power_law_objective()
spectral_phi_weights()
QuasilinearCalibrationPoint
apply_heat_flux_scale()
calibration_point_from_nonlinear_window_summary()
calibration_point_from_spectrum_and_nonlinear_window()
fit_train_heat_flux_scale()
integrated_quasilinear_flux_from_spectrum()
quasilinear_calibration_report()
write_quasilinear_calibration_report()
build_quasilinear_model_selection_status()
build_quasilinear_model_selection_status_from_paths()
ExternalHoldoutScreenRow
build_external_holdout_runbook()
external_vmec_family()
read_external_holdout_screen()
DecompositionContract
ReconstructionIdentityReport
ShardAssignment
build_diagnostic_nonlinear_domain_decomposition()
build_independent_portfolio_decomposition()
reconstruct_serial()
serial_reconstruction_identity_report()
shard_sequence()
ReducedPortfolioArtifactGuardConfig
StellaratorObjectivePortfolioContract
aggregate_objective_portfolio()
objective_portfolio_sensitivity_report()
portfolio_objective_weight_vector()
portfolio_sample_weight_tensor()
reduced_portfolio_artifact_guard_report()
validate_objective_portfolio_contract()
RuntimeLinearResult
RuntimeLinearScanResult
RuntimeNonlinearResult
build_runtime_geometry()
build_runtime_linear_params()
build_runtime_linear_terms()
build_runtime_term_config()
run_linear_case()
run_nonlinear_case()
run_runtime_linear()
run_runtime_nonlinear()
run_runtime_scan()