API Reference
=============

Basis
-----

.. automodule:: spectraxgk.basis
   :members:

Gyroaverage
-----------

.. automodule:: spectraxgk.gyroaverage
   :members:

Geometry
--------

.. automodule:: spectraxgk.geometry
   :members:

Differentiable Geometry
-----------------------

.. automodule:: spectraxgk.geometry.differentiable
   :members:

Grids
-----

.. automodule:: spectraxgk.grids
   :members:

Operators
---------

.. automodule:: spectraxgk.operators
   :members:

Linear
------

.. automodule:: spectraxgk.linear
   :members:

Linear Linked Boundaries
------------------------

.. automodule:: spectraxgk.linear_linked
   :members:
   :private-members:

Linear Cache
------------

.. automodule:: spectraxgk.linear_cache
   :members:
   :private-members:

Linear Moments
--------------

.. automodule:: spectraxgk.linear_moments
   :members:
   :private-members:

Linear Parameters
-----------------

.. automodule:: spectraxgk.linear_params
   :members:
   :private-members:

Linear Parallel RHS
-------------------

.. automodule:: spectraxgk.linear_parallel
   :members:
   :private-members:

Nonlinear Diagnostics
---------------------

.. automodule:: spectraxgk.nonlinear_diagnostics
   :members:
   :private-members:

Nonlinear Helpers
-----------------

.. automodule:: spectraxgk.nonlinear_helpers
   :members:
   :private-members:

Nonlinear Replicate Diagnostics
-------------------------------

.. automodule:: spectraxgk.nonlinear_replicate_diagnostics
   :members:

Nonlinear Replicate Follow-Up
-----------------------------

.. automodule:: spectraxgk.nonlinear_replicate_followup
   :members:

Benchmarks
----------

.. automodule:: spectraxgk.benchmarks
   :members:

Benchmark Defaults
------------------

.. automodule:: spectraxgk.benchmark_defaults
   :members:

Benchmark Scan Policies
-----------------------

.. automodule:: spectraxgk.benchmark_scan
   :members:
   :private-members:

Benchmarking
------------

.. automodule:: spectraxgk.benchmarking
   :members:

Validation Gates
----------------

.. automodule:: spectraxgk.validation_gates
   :members:

Autodiff Validation
-------------------

.. automodule:: spectraxgk.autodiff_validation
   :members:

Parallelization
---------------

.. automodule:: spectraxgk.parallel
   :members:

Velocity Sharding Plans
-----------------------

.. automodule:: spectraxgk.velocity_sharding
   :members:

Sharded Integrators
-------------------

.. automodule:: spectraxgk.sharded_integrators
   :members:

Zonal Validation
----------------

.. automodule:: spectraxgk.zonal_validation
   :members:

Analysis
--------

.. automodule:: spectraxgk.analysis
   :members:

Plotting
--------

.. automodule:: spectraxgk.plotting
   :members:

Config
------

.. automodule:: spectraxgk.config
   :members:

Normalization
-------------

.. automodule:: spectraxgk.normalization
   :members:

Runtime Config
--------------

.. automodule:: spectraxgk.runtime_config
   :members:

Runtime Policies
----------------

.. automodule:: spectraxgk.runtime_policies
   :members:
   :private-members:

Runtime Orchestration
---------------------

.. automodule:: spectraxgk.runtime_orchestration
   :members:
   :private-members:

Quasilinear Transport
---------------------

.. automodule:: spectraxgk.quasilinear
   :members:

Quasilinear Calibration
-----------------------

.. automodule:: spectraxgk.quasilinear_calibration
   :members:

Quasilinear Model Selection
---------------------------

.. automodule:: spectraxgk.quasilinear_model_selection
   :members:

External-VMEC Holdout Planning
------------------------------

.. automodule:: spectraxgk.external_holdout_plan
   :members:

Parallel Decomposition Contracts
--------------------------------

.. automodule:: spectraxgk.parallel_decomposition
   :members:

Stellarator Objective Portfolios
--------------------------------

.. automodule:: spectraxgk.stellarator_objective_portfolio
   :members:

Runtime Runner
--------------

.. automodule:: spectraxgk.runtime
   :members: